First, let's clean up your code, then we'll fix the problem.

Repeated Code

Big problem: repeated code. You repeat this code twice (plus most of the lines before it):

				print("Teleported.")
				if script.Configuration.SwordFighting.Value == true then
					local Sword = game.ServerStorage.ClassicSword:Clone()
					Sword.Parent = game.Players.LocalPlayer.Backpack
				end

There's no reason to have it in each branch --- just do it once after.

The remaining if is still pretty repetitious. If you just want to pick a random spawn, why not do that explicitly?

if game ~= nil then
	wait(2.5)
	for i, v in pairs(game.Players:GetChildren()) do
		local char = game.Players.LocalPlayer.Character
		if char.Torso ~= nil then
			local spawns = workspace.Map1.Spawns:GetChildren() -- List of all Spawns
			local spawn = spawns[math.random(#spawns)]
			char.Torso.CFrame = spawn.CFrame
			print("Teleported.")
			if script.Configuration.SwordFighting.Value == true then
				local Sword = game.ServerStorage.ClassicSword:Clone()
				Sword.Parent = game.Players.LocalPlayer.Backpack
			end
		end
	end
end

char.Torso ~= nil

You can't check for children like that. If there isn't a Torso, you get an error, not the value nil back. Use :FindFirstChild to check if there's a thing. Also, the ~= nil is redundant, and often just adds extra clutter.

== true is even more redundant than ~= nil.

game ~= nil

game can't be nil. This check just doesn't make sense. On a related note, you should just use workspace instead of game.Workspace.

for i, v in pairs(game.Players:GetChildren()) do

First, note that you should use :GetPlayers() instead of :GetChildren() to get a list of players. The difference is small, but that method exists for a reason.

You don't use either i or v in your code. This is a massive red flag. If you are defining variables but not using them, it means you're using something else.

In this case, it's pretty clear where that is.

LocalPlayer can only be used from a LocalScript. Even if it did work in a Server script, why would you want to use the same player over and over? v is the player that you want! You should use a better variable name, though:

wait(2.5)
for _, player in pairs(game.Players:GetPlayers()) do
	local char = player.Character
	if char:FindFirstChild("Torso") then
		local spawns = workspace.Map1.Spawns:GetChildren() -- List of all Spawns
		local spawn = spawns[math.random(#spawns)]
		char.Torso.CFrame = spawn.CFrame
		print("Teleported.")
		if script.Configuration.SwordFighting.Value then
			local Sword = game.ServerStorage.ClassicSword:Clone()
			-- in case they don't have a Backpack... use findfirstchild!
			Sword.Parent = player:FindFirstChild("Backpack")
		end
	end
end

There's one small thing more -- a .Character can be nil before they spawn for the first time. We should make sure char exists, too:

	local char = player.Character
	if char and char:FindFirstChild("Torso") then

Timing

One final problem. This script will run exactly once, and it will be precisely two and a half seconds after the server starts.

Chances are, not even on player has connected by that time -- definitely not two.

You'll want to choose more wisely when this script runs. By an event, or in a loop, periodically.